1.Ji X#, Chi L#, Wu L#, Chen J, Yan A, Li Y, Tu Z, Ye J, Chen H*. SMART: STR mixture profile analysis and resolution tools. Forensic Science International: Genetics. 2025. 74(2025) 1031418.（一区）

2.Chi L#, Dong Y#, Wang R#, Yang S#, Wu L#, Xue Y*, Chen H*. HapNetworkView: A tool for haplotype network exploration and visualization. BMC Genomics. 2025. （二区，Top期刊）

3.Zhang X#, Ji X#, Wang L#, Chi L, Li C*, Wen S*, Chen H*. STRsensor: a computationally efficient method for STR allele-typing from massively parallel sequencing data. Briefings in Bioinformatics. 2025.（一区，Top期刊）

4.Zhao S#, Chi L#, Fu M, Chen H*. HaploSweep: Detecting and distinguishing soft and hard sweeps through haplotype structure. Molecular Biology and Evolution. 2024. 41(10):msae192. （一区，Top期刊）

5.Zhao S#, Chi L#, Chen H*. CEGA: a method for inferring natural selection by comparative population genomic analysis across species. Genome Biology. 2023. 24, 219. （一区，Top期刊）

6.Chi L#, Zhang X#, Xue Y*, Chen H*. FastHaN: a fast and scalable program for constructing haplotype network. Molecular Ecology Resources. 2023. 00, 1– 5. https://doi.org/10.1111/1755-0998.13829. （一区，Top期刊）

7.Ji X, Chi L, Xu Z, Peng Z, Ye J, Tu Z*, Chen H*. SMART: an analysis system for mixed STR profiles. Forensic Science and Technology. 2022. 47(1):1-9. DOI：10.16467/j.1008-3650.2021.0136. （核心）

8. Chen T#, Chen X#, Zhang S#, Zhu J#, Tang B, Wang A, Dong L, Zhang Z, Yu C, Sun Y, Chi L, Chen H, Zhai S, Sun Y, Lan L, Zhang X, Xiao J, Bao Y, Wang Y*, Zhang Z*, Zhao W.* The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types.Genomics Proteomics Bioinformatics.2021.19(4):578-583.

9. Zhao S＃, Shi CM＃, Ma L＃, Liu Q, Liu Y, Wu F, Chi L, Chen H*. AIM-SNPtag: A computationally efficient approach for developing ancestry-informative SNP panels. Forensic Science International: Genetics. 2019 Jan 38:245-253.

10. Shi CM＃, Li C＃, Ma L＃, Chi L, Zhao J, Yuan W, Zhou Z, Yan JW*, Chen H*. Inferring Chinese surnames with Y-STR profiles. Forensic Science International: Genetics. 2018. 33:66-71. 

1.Ji X#, Chi L#, Wu L#, Chen J, Yan A, Li Y, Tu Z, Ye J, Chen H*. SMART: STR mixture profile analysis and resolution tools. Forensic Science International: Genetics. 2025. 74(2025) 1031418.（一区）

2.Chi L#, Dong Y#, Wang R#, Yang S#, Wu L#, Xue Y*, Chen H*. HapNetworkView: A tool for haplotype network exploration and visualization. BMC Genomics. 2025. （二区，Top期刊）

3.Zhang X#, Ji X#, Wang L#, Chi L, Li C*, Wen S*, Chen H*. STRsensor: a computationally efficient method for STR allele-typing from massively parallel sequencing data. Briefings in Bioinformatics. 2025.（一区，Top期刊）

4.Zhao S#, Chi L#, Fu M, Chen H*. HaploSweep: Detecting and distinguishing soft and hard sweeps through haplotype structure. Molecular Biology and Evolution. 2024. 41(10):msae192. （一区，Top期刊）

5.Zhao S#, Chi L#, Chen H*. CEGA: a method for inferring natural selection by comparative population genomic analysis across species. Genome Biology. 2023. 24, 219. （一区，Top期刊）

6.Chi L#, Zhang X#, Xue Y*, Chen H*. FastHaN: a fast and scalable program for constructing haplotype network. Molecular Ecology Resources. 2023. 00, 1– 5. https://doi.org/10.1111/1755-0998.13829. （一区，Top期刊）

7.Ji X, Chi L, Xu Z, Peng Z, Ye J, Tu Z*, Chen H*. SMART: an analysis system for mixed STR profiles. Forensic Science and Technology. 2022. 47(1):1-9. DOI：10.16467/j.1008-3650.2021.0136. （核心）

8. Chen T#, Chen X#, Zhang S#, Zhu J#, Tang B, Wang A, Dong L, Zhang Z, Yu C, Sun Y, Chi L, Chen H, Zhai S, Sun Y, Lan L, Zhang X, Xiao J, Bao Y, Wang Y*, Zhang Z*, Zhao W.* The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types.Genomics Proteomics Bioinformatics.2021.19(4):578-583.

9. Zhao S＃, Shi CM＃, Ma L＃, Liu Q, Liu Y, Wu F, Chi L, Chen H*. AIM-SNPtag: A computationally efficient approach for developing ancestry-informative SNP panels. Forensic Science International: Genetics. 2019 Jan 38:245-253.

10. Shi CM＃, Li C＃, Ma L＃, Chi L, Zhao J, Yuan W, Zhou Z, Yan JW*, Chen H*. Inferring Chinese surnames with Y-STR profiles. Forensic Science International: Genetics. 2018. 33:66-71.